Ecology of Soil Microorganisms
Microbes as Important Drivers of Soil Processes
27.4. - 1.5. 2011, Prague, Czech Republic
 
Aims
Topics
Keynote Speakers
Scientific commitee
Important dates
Venue
Contact
Local Organizing Committee
Conference fee
Conference website
Preliminary time plan
Programme Schedule
Sponsors
 
 
Aims

In the last few years, the research in microbial ecology made a significant step forward. With the occurrence and / or increased availability of modern methods of molecular biology, our knowledge of microorganisms in the environment increased substantially and allowed us to ask questions which were until then impossible to answer. However, the boom of large throughput sequencing methods or the use of sophisticated instruments for proteome analyses resulted mainly in the accumulation of large amounts of data. While this is a significant contribution to our knowledge of microbial biodiversity, the understanding of microbial processes and important environmental factors important for shaping the structure and function of microbial communities advance by far less.

Soil is an important environment studied by microbial ecologists, one of the longest continuous study and in the same time one of the most important. The future of sustainable food production, landscape protection, global change or a the production of renewable natural material that are likely to soon replace fossil fuels is intimately bound with the advancement in understanding soil.

The idea of the conference on Ecology of Soil Microorganisms was planned with the aim to create an environment where the nowadays classical research on microbial communities or (meta)genomes can interact with the current knowledge in other scientific disciplines. Mycology, despite the great achievements of the last years, seems to be still underrepresented in microbial ecology, despite the tremendous importance of fungi in many ecosystems. Biochemistry – and particularly enzymology – is needed to clue out what do the measured rates of microbial processes tell us about the cycling of elements and organic matter as a whole. Ecology of the soil environment should provide us with the framework of further reaching concepts that incorporate not only the diversity of microorganisms, but also their functions and properties of their abiotic environments. We would like to bring all the experts of these disciplines to a meeting where they can present their concepts of soil functioning and benefit from interactions.

With current molecular methods, it is quite simple to get a nice picture on the composition of microbial community in soil or the composition of genetic information or transcriptome of individual genes and, in some cases, to measure activities of enzymatic processes. But how should we proceed to link the pool of enzyme producers with the pool of transcripts? What does the transcriptome tell us about the rates of substrate transformation? And how sure we can be that the processes we measure are relevant in the environment and what are their driving factors? These questions are still not always simple to answer. The meeting in Spring 2011 in Prague may be a good opportunity to make a next step into the future of microbial ecology where complex understanding of microbial processes will follow the complex understanding of microbial biodiversity.
 
Topics

1. Microbial Nutrient Cycling and Biogeochemistry
2. Soil Organic Matter Decomposition and Enzymes in the Soil Environment: From Molecules to Communities
3. Fungi in the Soil Microbial Community: Symbioses, Competition, Antagonism
4. Interaction among Micro- and Macroorganisms in Soils
5. Microbes in the Changing Environment: Global Climate Change and Soils under Human Impact

6. Agricultural Soils: Biodiversity and Functioning
7. Microbial Diversity and Processes in
Forest Soils
8. Microbial Biodegradation Processes

9. Methods in Soil Microbial Ecology: Challenges and Limitations

 
Keynote Speakers

Jan Dirk van Elsas, The Netherlands, University of Groningen

Christa Schleper, Austria, University of Vienna
 
Scientific commitee
Petr Baldrian (Czech Republic)
Lynne Boddy (United Kingdom)
Dana Elhottova (Czech Republic)
Jan Dirk van Elsas (The Netherlands)
Martin Hofrichter (Germany)
Heribert Insam (Austria)
Paolo Nannipieri (Italy)
Michael Schloter (Germany)


 
Important dates
Registration opens   October 1, 2010
Abstract submission   December 5, 2010
Early Bird Registration   January 25, 2011
Final Programme Announcement   March, 2011
Conference   April 27-May 1, 2011

 
Venue
The conference will be held in Prague, one of the most beautiful cities in Europe, in the end of April, when tourists can hardly choose between the visit of hundreds of Prague historical monuments and the parks full of blossoming trees. The history of science in Prague goes back into the Middle Ages. In 1348, the oldest university in Central Europe, Charles University was founded in Prague. In the 20th century, Prague is connected with the name of Albert Einstein who spent several years of his creative life there and with the name of the Nobel Prize winner, Jaroslav Heyrovsky, the founder of polarography.

Today, in addition to the Charles University that still ranks to the Europes best, several institutes of the Academy of Sciences significantly contribute to world science. The largest campus of Academy of Sciences, in Prague, the campus of the institutes for biomedical research will be hosting the conference.

The meeting will take place in the modern conference centre of the Institute of Molecular Genetics and Institute of Microbiology in the campus of the Biological Institutes of the Academy of Sciences. The institutes take advantage of their neighborhood with one of the Prague largest forest-park as well as of a good connection to the Prague centre, which can be reached in less than half an hour by public transportation. Accomodation of conference participants will offer a choice of closely located hotels as well as those in the town center, the offer ranging from budget to high level accomodation.

 
Contact
To join the mailing list for further correspondence (circulars, programme, etc.), please send an e-mail with the subject "mailing list" and your name and institution to: info @ soilmicrobes . org

Please contact
Petr Baldrian, Institute of Microbiology, Videnska 1083, 14220, Prague 4, Czech Republic for further information
e-mail: info @ soilmicrobes . org
Tel: +420-723770570
 
Local Organizing Committee

Petr Baldrian (Institute of Microbiology, Prague) - head

Tomáš Cajthaml (Institute of Microbiology, Prague)

Alica Chroňáková (Institute of Soil Biology, Ceske Budejovice)
Dana Elhottova (Institute of Soil Biology, Ceske Budejovice)

Jiří Gabriel (Institute of Microbiology, Prague)

Milan Gryndler (Institute of Microbiology, Prague)

Václav Krištůfek (Institute of Soil Biology, Ceske Budejovice)

Markéta Marečková (Research Institute of Crop Production, Prague)

František Nerud (Institute of Microbiology, Prague)

Martin Pospíšek (Charles University, Prague)

Hana Šantrůčková (University of South Bohemia, Ceske Budejovice)

Miloslav Šimek (Institute of Soil Biology, Ceske Budejovice)

Vendula Valášková (Institute of Microbiology, Prague)
 
Conference fee

Conference fee will cover participation at all sessions, conference materials (book of abstracts), lunches and coffe breaks during conference and welcome reception. Excursions and gala dinner can be booked separately.

 
Conference website

Located at info.soilmicrobes.org (active since June 15, 2009) offers already the basic information about the meeting and the possibility of joining the mailing list. As far, about one hundred scientists already expressed their interest in the conference by joining the mailing list.

 
Preliminary time plan
Website and mailing
In function
First Circular    May 15, 2010
Scientific committee meeting 
August 2010
Second Circular 
September 15, 2010
Registration opens   
October 1, 2010
Abstract submission   
December 5, 2010
Paper acceptance acknowledgement December 15, 2010
Early Bird Registration 
January 25, 2011
Final Programme Announcement
March, 2011

                      

 
Programme Schedule

Wednesday, April 27               Registration

Conference opening

                                               Keynote Lecture

                                               Welcome Reception

 

Thursday, April 28                   Sessions 1-2

                                               Poster Session I

 

Friday, April 29                       Sessions 3-4

                                               Excursion

                                               Gala Dinner

 

Saturday, April 30                   Sessions 5-7

                                               Poster Session II

 

Sunday, May 1                        Sessions 8-9

                                               Keynote lecture

Closing

 
Sponsors
We encourage our potential sponsors to contact organizers soon, any support is welcome  - please contact Dr. Petr Baldrian, e-mail: baldrian@biomed.cas.cz