Publications,
Abstracts, PhD and
MSc theses
Publications:...............
- Mokrejš M., Vopálenský V., Mašek T., Pospíšek M. (2007) A Bioinformatical
Approach to the Analysis of Viral and Cellular Internal Ribosome Entry Sites
In: Columbus F editors. New Messenger RNA Research Communications.
Hauppauge, NY: Nova Science Publishers; in press, https://www.novapublishers.com/catalog/product_info.php?products_id=5178
- Valis K., Masek T., Novotna D., Pospisek M., Janderova B. (2006) Immunity
to Killer Toxin K1 is Connected with the Golgi-to-Vacuole Protein Degradation
Pathway. Folia Microbiologica 51(3):196-202.
- Mokrejs M., Vopalensky V., Kolenaty O., Masek T., Feketova Z., Sekyrova
P., Skaloudova B., Kriz V., Pospisek M. (2006) IRESite: Database of experimentally
verified IRES structures (www.iresite.org). Nucleic Acids Research,
Jan 1; Vol. 34, Database issue D125-D130, doi:10.1093/nar/gkj081
- Swaminathan S, Masek T, Molin C, Pospisek M, Sunnerhagen P. (2006) Rck2
Is Required for Reprogramming of Ribosomes during Oxidative Stress.
Mol Biol Cell. 17(3):1472-82.
- Dvorak J., Delcroix M., Rossi A., Vopalensky V., Pospisek M., Sedinova M,
Mikes L., Sajid M., Sali A., McKerrow J.H., Horak P., Caffrey CR. (2005) Multiple
cathepsin B isoforms in schistosomula of Trichobilharzia regenti: identification,
characterisation and putative role in migration and nutrition . International
Journal of Parasitology. Jul;35(8):895-910.
- Masek T, Vopalensky V, Suchomelova P, Pospisek M. (2005) Denaturing RNA
electrophoresis in TAE agarose gels. Anal. Biochem. 1;336(1):46-50
- Buryskova M., Pospíšek M., Grothey A., Simmet T., Burysek L. (2004) Intracellular
interleukin-1alpha functionally interacts with histone acetyltransferase complexes,
J. Biol. Chem. 6;279(6):4017-26. Epub 2003 Nov 11. (10.1074/jbc.M306342200)
- Nesměrák K., Pospíšek M., Zikánová B., Němec I., Barbe J., Gabriel J. (2002)
Effect of structure on antibiotic action of new 9-(ethylthio)acridines. Folia
Microbiol. 47, 118-120
- Vaněk D., Pospíšek M. (2002) An improved method for rapid ABO genotyping.
Sborník lékařský Vol.103 No.1, 29-33
- Nesměrák K., Pospíšek M., Němec I., Waisser K., Gabriel J. (2000) Antifungal
properties of substituted 1-phenyl-5-mercaptotetrazoles and their oxidation
product, 5-bis-(1-phenyltetrazolyl) disulfide. Folia Microbiol.
45, 138-142
- Vaněk D., Pospíšek M. (2000) Estimation of postmortem interval using DNA
analysis. Progress in Forensic Genetics 8, 585-587
- Baldrian P., Gabriel J., Pospíšek M. (1999) Improved isolation of nucleic
acids from basidiomycete fungi. BioTechniques 27, 458-462
- Pospíšek M., (1998) Kvasinkové dsRNA viry I (Yeast dsRNA viruses I). Biologické
listy 63 (2): 81-113 (review, in Czech with English abstract).
- Pospíšek M., (1998) Kvasinkové dsRNA viry II (Yeast dsRNA viruses II).
Biologické listy 63 (2): 115-138 (review, in Czech with English abstract).
- Pospíšek M., Vaněk D. (1998) Co je nového ve forenzní molekulární genetice?
(Zpráva ze 17. mezinárodní konference ISFH). (What is new in forensic molecular
biology - report) Biologické listy 63 (2), 155-156 (in Czech)
- Palková Z., Janderová B., Gabriel J., Zikánová B., Pospíšek M., Forstová
J. (1997) Ammonia mediates communication between yeast colonies. Nature
390(6659):532-536.
- Pospíšek M., Palková Z., Korb J., Vaněk D. (1996) Isolation and characterization
of a new dsRNA virus from the yeast Wickerhamia fluorescens. Folia
Microbiol. 41, 223-227.
- Palková Z., Pospíšek M., Zikánová B. (1996) The techniques for colony DNA
hybridisation and protein immunoassays for a broad spectrum of yeast genera.
BioTechniques 21, 2-3.
- Gabriel J., Pospíšek M., Palková Z., Němeček J., Havlíček V., Volc J., Kubátová
E. (1996) Formation of new antimicrobial 13H benzodiazepino[2,3-b]quinoxalines
during the reaction of 4-deoxy-2,3-aldosdiuloses with o-phenylenediamine.
Pharmaceutical Science 1, 581-583
- Vaněk D., Pospíšek M., Laupy M. (1996) Forenzní genetika a kriminalistická
praxe. (Genetics in a practical criminology) Kriminalistika
29, 213-216 (review in Czech).
- Pospíšek M., Palková Z., Janderová B., Korb J. (1994) Isolation and characterization
of the dsRNA virus from the yeast Endomyces magnusii. FEMS Microbiol.
Lett. 116, 231-236.
- Gabriel J., Volc J., Kubátová E., Palková Z., Pospíšek M. (1994) A convenient
laboratory procedure for the preparation of cortalcerone, a fungal antibiotic
beta-pyrone. Carbohydrate Research 252, 297-301.
- Gabriel J., Volfová I., Palková Z., Pospíšek M., Urban J. (1994) Antibiotická
aktivita cortalceronu a jeho 7-difenylhydrazonu (An antibiotic activity of
cortalcerone and its derivative 7 difenylhydrazone). Česká a Slovenská
Farmacie 43, 9-10 (in Czech).
- Pospíšek M., Palková Z. (1991) Microisolation of yeast nucleic acids on
the microtitre plate without using lytic enzymes, Nucleic Acids Res.
19, 5083.
Abstracts:...............
Our abstracts which were not lost or forgotten from various conferences in a
chronological order.
2008.................
2007 .................
2006 .................
- Feketová Z., Mašek T., Vopálenský V., Pospíšek M., Cap-binding translation
initiation factor 4E from Candida albicans functionally complements the cdc33
mutation in Saccharomyces cerevisiae and confers temperature sensitivity to
the heterologous host., Translational Control and Non-Coding RNA, November
8-12, 2006, Nove Hrady
- Mokrejš M., Vopálenský V., Mašek T., Pospíšek M., (2006) A bioinformatical
approach to analysis of viral and cellular internal ribosome entry sites (IRESs),
Translational control and non-coding RNA Meeting , November 8-12, 2006, Nové
Hrady, Czech Republic
- Mašek T., Pospíšek M. (2006) Assesing Hepatitis C virus IRES functionality
in living yeast cells, Translational Control and Non-Coding RNA Meeting, November
8-12, Nove Hrady, Czech Republic
- Mokrejš M., Vopálenský V., Mašek T., Pospíšek M., (2006) Bioinformatická
analýza IRES segmentů eukaryot a vyhodnocení jejich predikčních možností,
RNA klub 2006, Praha, Czech Republic
- Masek T., Pospisek M. (2006) Hepatitis C Virus AUG at Position 342 Serves
as an Authentic Initiation Codon in Yeast Cells, 11th Annual Meeting of the
RNA Society, June 20-25, Seattle, WA, USA.
- Mokrejš M. (2006) IRESite database (www.iresite.org) as a curated resource
of experimental data: What did we learn during the first 2 years of its existence?,
FOBIA, Telč, Czech Republic
2005 .................
- Vopálenský V., Horvath O., Pospíšek M., (2005) Construction of a new bicistronic
reporter assay system for analysis of the diversity of HCV IRES quasispecies,
EMBO Conference on Protein Synthesis and Translational Control, 14.-18.9.2005,
Heidelberg
- Masek T._, Pospisek M. (2005) Hepatitis C Virus is functional in yeast cells,
EMBO Conference on Protein Synthesis and Translational Control, 14.-18.9.2005,
Heidelberg
- Mokrejš M., Kolenatý O., Vopálenský V., Mašek T., Feketová Z., Škaloudová
B., Pospíšek M., (2005) IREsite - The database of experimentally studied viral
and cellular IRES elements, EMBO Conference on Protein Synthesis and Translational
Control, 14.-18.9.2005, Heidelberg
- Feketová Z., Mašek T., Vopálenský V., Pospíšek M., ORF 19.7626 from C.albicans
functionally complements the cdc33 mutation in S.cerevisiae, EMBO Conference
on Protein Synthesis and Translational Control, 14.-18.9.2005, Heidelberg
- Feketová Z., Vopálenský V., Mašek T., Pospíšek M., (2005) Cap-binding translation
initiation factor 4E from Candida albicans functionally complements the cdc33
mutation in Saccharomyces cerevisiae and confers temperature sensitivity to
the heterologous host, XXII. International Conference on Yeast Genetics &
Molecular Biology, 7.-12.8.2005, Bratislava
- Mokrejš M., Kolenatý O., Vopálenský V., Mašek T., Feketová Z., Škaloudová
B., Pospíšek M., (2005) IRESite - the database of experimentally studied viral
and cellular IRES elements, Xth Annual Meeting of the RNA Society, Banff,
Canada
- Mokrejš M., Kříž V., Vopálenský V., Mašek T., Pospíšek M., (2005) IRESite:
Databáze experimentálně studovaných IRES struktur mRNA. FOBIA, Svatý Jan pod
Skalou, Czech Republic
- Feketová Z., Mašek T., Vopálenský V., Pospíšek M., (2005) ORF 19.7626 from
C.albicans functionally complements the cdc33 mutation in S.cerevisiae, RNA
Club, 3.10.2005, České Budějovice
- Buryskova M, Walker J, Vicenova B, Pospisek M, Simmet T, Burysek L (2005)
Novel biological role of intracellular interleukin-1 alpha in antiviral defence.
NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY 371: R68-R68 288 Suppl. 1, FEB
2005
2004 .................
- Pospíšek M., (2004) Člověk versus hepatitida C, 23.kongres Československé
společnosti mikrobiologické, 6.-9.9.2004, Brno
- Svobodová M., Mašek T., Popíšek M., (2004) Vliv mutací v genech CDC33, CEG1
a ABD1 na životaschopnost buněk S. cerevisiae, 23.kongres Československé společnosti
mikrobiologické, 6.-9.9.2004, Brno
- Mokrejš M., Kříž V., Vopálenský V., Mašek T., Pospíšek M., IRESite: (2004)
Databáze experimentálně studovaných IRES struktur mRNA, 23.kongres Československé
společnosti mikrobiologické, 6.-9.9.2004, Brno
- Škaloudová B., Mašek T., Pospíšek M., (2004) Studium iniciace translace
pomocí cDNA mikročipů, 23.kongres Československé společnosti mikrobiologické,
6.-9.9.2004, Brno
- Feketová Z., Vopálenský V., Mašek T., Pospíšek M., (2004) Expresia eIF4G
Candida albicans v Saccharomyces cerevisiae, 23.kongres Československé společnosti
mikrobiologické, 6.-9.9.2004, Brno
- Pejznochová M., Vopálenský V., Pospíšek M., (2004) Lineární plasmidy z kvasinky
Kluyveromyces lactis pravděpodobně kódují helikasu, 23.kongres Československé
společnosti mikrobiologické, 6.-9.9.2004, Brno
- Sekyrová P., Vopálenský V., Pospíšek M., (2004) Proteom lineárních pGKL
plazmidů kvasinky Kluyveromyces lactis, 23.kongres Československé společnosti
mikrobiologické, 6.-9.9. 2004, Brno
- Mašek T., Škaloudová B., Feketová Z., Pospíšek M., (2004) Studium kmenů
defektních v syntéze čepičky u S. cerevisiae, 23.kongres Československé společnosti
mikrobiologické, 6.-9.9. 2004, Brno
- Swaminathan S., Masek T., Pospisek M., Sunnerhagen P., (2004) Role of Rck2
in global transcriptional and translational regulation upon oxidative stress,
Yeast Genetics and Molecular Biology Meeting, University of Washington, Seattle,
Kanada, 27.7.-1.8. 2004
- Vališ K., Mašek T., Novotná D., Pospíšek M., Janderová B., (2004) Suicidal
phenotype: Does exist in K1killer toxin producing cells?, 32. Výročná konferencia
o kvasinkách, Smolenice, Slovensko, 12.-14.5.2004
- Mokrejš M., Kříž V., Vopálenský V., Mašek T., Pospíšek M., (2004) Databáze
experimentálně studovaných IRES struktur mRNA uvádění do života, RNA Klub,
23.9.2004, Praha
- Mašek T., Vopálenský V., Suchomelová P., Pospíšek M., (2004) Denaturing
RNA electrophoresis in TAE agarose gels, RNA Klub, 23.9.2004, Praha
- Buryskova M, Pospisek M, Simmet T, Burysek L (2004) Functional properties
and molecular interactions of intracellular interleukin-la. NAUNYN-SCHMIEDEBERGS
ARCHIVES OF PHARMACOLOGY 369: R73-R73 290 Suppl. 1, MAR 2004
- Buryskova M, Pospisek M, Simmet T, Burysek L (2004) In vitro and in vivo
interactions of intracellular interleukin-1 alpha with various histone acetyltransferases
and transcriptional adaptor proteins. NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY
369: R78-R78 312 Suppl. 1, MAR 2004
2003 .................
- Masek T, Svobodova M, Sunnerhagen P, Pospisek M (2003) Examination of proteosynthesis
and mRNA stability in yeast strains with impaired 5'-cap synthesis. 8th Annual
Meeting of the RNA Society, July 1-6th, 2003, Vienna, Austria
- Svobodova M, Masek T, Pospisek M (2003) mRNA stability in yeast strains
impaired in 5'-mRNA cap synthesis. XXIth YGM Conference,
July 7-12th, 2003, Göteborg, Sweden
- Sekyrova P, Vopalensky V, Pospisek M (2003) Protein ensemble of yeast linear
plasmids. XXIth YGM Conference, July 7-12th, 2003, Göteborg, Sweden
- Masek T, Swaminathan S, Pospisek M, Sunnerhagen P (2003) Effect of Rck2p
on translation during oxidative stress in Sacharomyces cerevisiae. XXIth YGM
Conference, July 7-12th, 2003, Göteborg, Sweden
- Vopalensky V, Pospisek M (2003) 5' end formation of the linear plasmid
mRNAs. XXIth YGM Conference, July 7-12th, 2003, Göteborg, Sweden
- Pejznochova M, Vopalensky V, Pospisek M (2003) Cytoplasmic helicase encoded
by pGKL plasmids. XXIth YGM Conference, July 7-12th, 2003, Göteborg,
Sweden
- Buryskova M., Pospisek M., Simmet Th., Burysek L. (2003): Das N-terminale
Peptid von Interleukin 1a kooperiert mit dem Histon-Acetyltransferasekomplex
und transaktiviert den Gal4 Promoter. , 44th Annual Meeting of DGPT, Mainz,Germany.
- Masek T, Sunnerhagen P, Mosovska M, Pospisek M (2003) DNA microarray analysis
of mRNA content in polysomes from yeast strains with impaired 5' - mRNA cap
synthesis. EMBO Workshop, C.N.R.S - Conference Jacques Monod, "Non coding
RNA: Its role in translation and gene regulation", January 14th to 19th,
2003, Aussois
2002.................
- Vopálenský V, Pospíšek M (2002) Production of selected proteins encoded
by linear pGKL plasmid of the yeast Kluyveromyces lactis in a various
expression systems. XVth Meeting on the Biology of Kluyveromyces 6.-8.9.2002,
Smolenice, Slovakia
- Buryskova, M., Pospisek M., Simmet T., and Burysek L. (2002). The N-terminal
peptide of interleukine-1 alpha ooperates with histone acetyltransferase complexes
and transactivates the Gal4 promoter. Cytokines and Interferons. Joint meeting
of ICS, ISICR, ECS and SLB, Torino, Italy.
2001.................
- Vopálenský V, Pospíšek M (2001) Transcription and mRNA modification systems
of linear pGKL plasmids. XXth International conference on Yeast Genetics and
Molecular Biology. Yeast 18: S61
- Pospíšek M, Zikánová B, Mokrejš M (2001) Purification and characterization
of the Dipodascus (Endomyces) magnusii toxin. XXth International
conference on Yeast Genetics and Molecular Biology. Yeast 18: S334
- Nesměrák K, Pospíšek M, Zikánová B, Němec J, Barbe, Gabriel J (2001) Vliv
substituentů na antibiotickou aktivitu 9-(ethylthio)akridinu. 22. Kongres
ČSSM, 5.-9.9.2001, Košice, SR
2000.................
- Vopálenský V., Pospíšek M., (2000) Produkce heterologních proteinů v Escherichia
coli. XXVIII Výroèní konference o kvasinkách, 15.- 17.5.2000, Kniha
abstraktů str.96
- Mokrejš M., Pospíšek M. (2000) dsRNA virus of yeast-like organism Endomyces
magnusii. Tomasek days in Brno, 7.-9. June 2000, Czech Republic
older ...............
- Gabriel J., Havlíček V., Stádníková L., Pospíšek M., Valíček P. (1996) Antimikrobiální
metabolity Eleutherine subaphylla (Antimicrobial metabolites of
Eleutherine subaphylla). poster on XXV. Výroční konferenci o kvasinkách,
Smolenice, duben 1996, Abstract book p. 46
- Pospíšek M., Palková Z., Korb J. (1995) Nový dsRNA virus kvasinek Wickerhamia
fluorescens; poster na XXIV. Výroční konferenci o kvasinkách, Smolenice,
květen 1995
- Palková Z., Pospíšek M., Zikánová B. (1995) Rapid techniques for colony
DNA hybridisation and protein immunoassays for a broad spectrum of yeast genera.
Yeast 11 (spec. issue), S581
- Gabriel J., Pospíšek M., Palková Z., Němeček J., Havlíček V., Volc J., Kubátová
E. (1995) Formation of 6-substitued 13H-1,5-benzodiazepino[2,3-b]quinoxalines
during the reaction of 4-deoxy-2,3-aldosdiuloses with o-phenylenediamine.
Symposium on heterocyclic compounds, Hradec Králové, 28.6.-1.7.1995, Book
of Abstr. p. 155.
- Pospíšek M., Palková Z., Vondrejs V., Zadražil S. (1994) Production systems
for recombinant hEGF in microorganisms. IUMS Congresses, Prague 1994, Abstract
book p. 505.
- Pospíšek M., Palková Z., Korb J. (1994) A new dsRNA virus from the yeast
Wickerhamia fluorescens. IUMS Congresses, Prague 1994, Abstract book
p. 363
- Gabriel J., Volc J., Kubátová E., Palková Z., Pospíšek M., Volfová I. (1993)
Pøíprava a vlastnosti nového antibiotika cortalceronu (Preparation
and features of a new antibiotics - cortalcerone). 43. Farmakologické dny,
8.-10.9.1993, Abstract in Čs. Fyziologie 42, 140
- Pospíšek M., Palková Z., Korb J., Janderová B. (1992) Viral dsRNAs from
the yeast Endomyces magnusii. Yeast 8 (spec. issue), S435
Ph.D. & M.Sc. theses and B.Sc. seminar works:...............
(all M.Sc. and Ph.D. theses listed below can be borrowed from the library)
- Mokrejs Martin (2005) - Ph.D. thesis
Tvorba biologických databází a praktické souvislosti spojené s jejich používáním
- Svobodová Michaela (2005) - M.Sc. thesis
Vliv mutací v genech CDC33, CEG1 a ABD1 na životaschopnost buněk Saccharomyces
cerevisiae
- Vicenová Blanka (2005) - M.Sc. thesis
Po stopách interleukinu -1alfa
- Sekyrová Petra (2004) - M.Sc. thesis
- Pejznochová Martina (2004) - M.Sc. thesis
Nová DNA helikasa kódovaná lineárními plasmidy pGKL
- Kříž Vítězslav (2004) - M.Sc. thesis
Otevřený sběr dat po internetu pro speciální DBS, KSI, TU Liberec, hlavní
školitel RNDr. K. Císařová
- Stibůrek Lukáš (2003) - M.Sc. thesis
RNA (guanosin-N7) methyltransferasa a translační iniciační faktor elF4E kvasinky
Saccharomyces cerevisiae
- Mokrej Martin, (2000) - M.Sc.
thesis Charakterizace dsRNA viru kvasinkovitého organismu
Dipodascus magnusii (Characterization of the dsRNA virus from the yeast-like
organism)
- Vopálenský Václav, (1999) - M.Sc.
thesis Lineární plasmidy kvasinek (Yeast linear plasmids)
- Jakub Friedl, (2000)
- B.Sc. seminar work Osudy
mRNA v kvasince Saccharomyces cerevisiae
(mRNA fate in the yeast Saccharomyces
cerevisiae)